SNP Profiles of EQX 69 [EQX] View Data

Show/Hide Profiles

	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	TT	CC	CC	GG	CT	AG	AA	CC	AA	CT	AA	GG	AA	CC
1._EQX_69_[EQX]	_	_	CC	GG	CT	_	AA	CC	AA	CT	_	_	AA	_
2._EQX_69_[EQX]	_	_	CC	GG	CT	_	AA	CC	AA	CT	_	_	AA	_
3._EQX_69_[EQX]	_	_	CC	GG	CT	_	AA	CC	AA	CT	_	_	AA	_
4._EQX_69_[EQX]	_	_	CC	GG	CT	_	AA	CC	AA	CT	_	_	AA	_
5._EQX_69_[EQX]	_	_	CC	GG	CT	_	AA	CC	AA	CT	_	_	AA	_
6._EQX_69_[EQX]	_	_	CC	GG	CT	_	AA	CC	AA	CT	_	_	AA	_
7._EQX_69_[EQX]	_	_	CC	GG	CT	_	AA	CC	AA	CT	_	_	AA	_
8._EQX_69_[EQX]	_	_	CC	GG	CT	_	AA	CC	AA	CT	_	_	AA	_
9._EQX_69_[EQX]	_	_	_	GG	CT	_	_	CC	AA	CT	_	_	AA	_
10._RUQ_100	_	_	CC	_	_	_	_	_	AA	_	AA	_	_	_
11._RUQ_100	_	_	CC	GG	CT	_	AA	CC	AA	CT	_	_	AA	_
12._GC-01-008-1-08	TT	CC	CC	GG	CT	AG	AA	CC	AA	CT	AA	GG	AA	CG
13._GC-01-008-1-08	TT	CC	CC	GG	CT	AG	AA	CC	AA	CT	AA	GG	AA	CG
14._GC-01-008-1-08	TT	CC	CC	GG	CT	AG	AA	CC	AA	CT	AA	GG	AA	CG
15._GC-01-008-1-08	TT	CC	CC	GG	CT	AG	AA	CC	AA	CT	AA	GG	AA	CG
16._GC-01-008-1-08	TT	CC	CC	GG	CT	AG	AA	CC	AA	CT	AA	GG	AA	CG
17._GC-01-008-1-08	TT	CC	CC	GG	CT	AG	AA	CC	AA	CT	AA	GG	AA	CG
18._GC-01-008-1-08	TT	CC	CC	GG	CT	AG	AA	CC	AA	CT	AA	GG	AA	CG
19._GC-01-008-1-08	TT	CC	CC	GG	CT	AG	AA	CC	AA	CT	AA	GG	AA	CG
20._GC-01-008-1-08	TT	CC	_	GG	CT	AG	_	CC	AA	CT	AA	GG	AA	CG
21._GC-01-8-1-8	AA	CC	CC	CC	AG	AG	AA	GG	AA	AG	AA	GG	AA	CG
22._RUQ_100	AA	CC	CC	CC	AG	AG	AA	GG	AA	AG	AA	GG	AA	CG

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	AG	CC	GT	CG	CC	CT	CT	TT	GG	AG	GT	AC	CG	CC
1._EQX_69_[EQX]	AG	CC	GT	CG	CC	_	CT	_	GG	_	_	_	CG	_
2._EQX_69_[EQX]	AG	CC	GT	CG	CC	_	CT	_	GG	_	_	_	CG	_
3._EQX_69_[EQX]	AG	CC	GT	CG	CC	_	CT	_	GG	_	_	_	CG	_
4._EQX_69_[EQX]	AG	CC	GT	CG	CC	_	CT	_	GG	_	_	_	CG	_
5._EQX_69_[EQX]	AG	CC	GT	CG	CC	_	CT	_	GG	_	_	_	CG	_
6._EQX_69_[EQX]	AG	CC	GT	CG	CC	_	CT	_	GG	_	_	_	CG	_
7._EQX_69_[EQX]	AG	CC	GT	CG	CC	_	CT	_	GG	_	_	_	CG	_
8._EQX_69_[EQX]	_	CC	GT	CG	CC	_	CT	_	GG	_	_	_	CG	_
9._EQX_69_[EQX]	AG	CC	GT	CG	CC	_	CT	_	GG	_	_	_	CG	_
10._RUQ_100	_	CC	_	CG	CC	CT	_	TT	GG	AG	_	AC	CG	_
11._RUQ_100	AG	CC	GT	CG	CC	_	CT	_	GG	_	_	_	CG	_
12._GC-01-008-1-08	AG	CC	GT	CG	CC	CT	CT	CT	GG	AG	GT	AC	CG	CC
13._GC-01-008-1-08	AG	CC	GT	CG	CC	CT	CT	CT	GG	AG	GT	AC	CG	CC
14._GC-01-008-1-08	AG	CC	GT	CG	CC	CT	CT	CT	GG	AG	GT	AC	CG	CC
15._GC-01-008-1-08	AG	CC	GT	CG	CC	CT	CT	CT	GG	AG	GT	AC	CG	CC
16._GC-01-008-1-08	AG	CC	GT	CG	CC	CT	CT	CT	GG	AG	GT	AC	CG	CC
17._GC-01-008-1-08	AG	CC	GT	CG	CC	CT	CT	CT	GG	AG	GT	AC	CG	CC
18._GC-01-008-1-08	_	CC	GT	CG	CC	CT	CT	CT	GG	AG	GT	AC	CG	CC
19._GC-01-008-1-08	AG	CC	GT	CG	CC	CT	CT	CT	GG	AG	GT	AC	CG	CC
20._GC-01-008-1-08	AG	CC	GT	CG	CC	CT	CT	CT	GG	AG	GT	AC	CG	CC
21._GC-01-8-1-8	_	CC	AC	CG	CC	AG	AG	_	CC	AG	AC	AC	CG	_
22._RUQ_100	_	CC	AC	CG	CC	AG	AG	_	CC	AG	AC	AC	CG	_

	29	30	31	32	33	34	35	36	37	38	39	40	41
_Input profile	CC	AG	CC	CT	GG	GG	TT	TT	TT	TT	TT	CG	AA	X_X
1._EQX_69_[EQX]	CC	AG	_	CT	_	_	_	TT	_	_	TT	CG	AA	X_X
2._EQX_69_[EQX]	CC	AG	_	CT	_	_	_	TT	_	_	TT	CG	AA	X_X
3._EQX_69_[EQX]	CC	AG	_	CT	_	_	_	TT	_	_	TT	CG	AA	X_X
4._EQX_69_[EQX]	CC	AG	_	CT	_	_	_	TT	_	_	TT	CG	AA	X_X
5._EQX_69_[EQX]	CC	AG	_	CT	_	_	_	TT	_	_	TT	CG	AA	X_X
6._EQX_69_[EQX]	CC	AG	_	CT	_	_	_	TT	_	_	TT	CG	AA	X_X
7._EQX_69_[EQX]	CC	AG	_	CT	_	_	_	TT	_	_	TT	CG	AA	X_X
8._EQX_69_[EQX]	CC	AG	_	CT	_	_	_	TT	_	_	TT	CG	AA	X_X
9._EQX_69_[EQX]	CC	AG	_	CT	_	_	_	TT	_	_	TT	CG	AA	X_X
10._RUQ_100	_	AG	CC	_	_	_	_	TT	_	_	_	CG	_	X_X
11._RUQ_100	CC	AG	_	CT	_	_	_	TT	_	_	TT	CG	AG	X_X
12._GC-01-008-1-08	CC	AG	CC	CT	GG	GG	TT	TT	TT	TT	TT	CG	AA	X_X
13._GC-01-008-1-08	CC	AG	CC	CT	GG	GG	TT	TT	TT	TT	TT	CG	AA	X_X
14._GC-01-008-1-08	CC	AG	CC	CT	GG	GG	TT	TT	TT	TT	TT	CG	AA	X_X
15._GC-01-008-1-08	CC	AG	CC	CT	GG	GG	TT	TT	TT	TT	TT	CG	AA	X_X
16._GC-01-008-1-08	CC	AG	CC	CT	GG	GG	TT	TT	TT	TT	TT	CG	AA	X_X
17._GC-01-008-1-08	CC	AG	CC	CT	GG	GG	TT	TT	TT	TT	TT	CG	AA	X_X
18._GC-01-008-1-08	CC	AG	CC	CT	GG	GG	TT	TT	TT	TT	TT	CG	AA	X_X
19._GC-01-008-1-08	CC	AG	CC	CT	GG	_	TT	TT	TT	TT	TT	CG	AA	X_X
20._GC-01-008-1-08	CC	AG	CC	CT	GG	GG	TT	TT	TT	TT	TT	CG	AA	X_X
21._GC-01-8-1-8	GG	AG	_	AG	CC	GG	_	AA	AA	AA	AA	CG	AA	X_X
22._RUQ_100	GG	AG	_	AG	CC	GG	_	AA	AA	AA	AA	CG	AA	X_X

Input profile: EQX_69_[EQX] RUQ_100

View View all Clone Any

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

1._EQX_69_[EQX]

identical
23 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 1106 1

Dapeng Zhang, 2016

Population Assignment:

Dapeng Zhang, 2016

2._EQX_69_[EQX]

identical
23 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 1106 2

Dapeng Zhang, 2016

3._EQX_69_[EQX]

identical
23 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 1106 3

Dapeng Zhang, 2016

4._EQX_69_[EQX]

identical
23 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 1106 12

Dapeng Zhang, 2016

5._EQX_69_[EQX]

identical
23 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 1106 10 > F

Dapeng Zhang, 2016

6._EQX_69_[EQX]

identical
23 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 1106 14 > F

Dapeng Zhang, 2016

7._EQX_69_[EQX]

identical
23 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 1106 7 > FP

Dapeng Zhang, 2016

8._EQX_69_[EQX]

identical
22 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 1106 16

Dapeng Zhang, 2016

9._EQX_69_[EQX]

identical
21 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 1106 9 > FP

Dapeng Zhang, 2016

10._EQX_69_[EQX] RUQ_100

identical
16 shared markers

View View all Clone Any

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

11._EQX_69_[EQX] RUQ_100

97.8 %
23 shared markers

View View all Clone Any

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2016

12._EQX_69_[EQX] GC-01-008-1-08

97.6 %
41 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 14

Notes: 14 > FP3

13._EQX_69_[EQX] GC-01-008-1-08

97.6 %
41 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 12

Notes: 12

14._EQX_69_[EQX] GC-01-008-1-08

97.6 %
41 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 10

Notes: 10 > FP2

15._EQX_69_[EQX] GC-01-008-1-08

97.6 %
41 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 7

Notes: 7 > FP4

16._EQX_69_[EQX] GC-01-008-1-08

97.6 %
41 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 3

Notes: 3

17._EQX_69_[EQX] GC-01-008-1-08

97.6 %
41 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 2

Notes: 2

18._EQX_69_[EQX] GC-01-008-1-08

97.5 %
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 16

Notes: 16

19._EQX_69_[EQX] GC-01-008-1-08

97.5 %
40 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 1

Notes: 1

20._EQX_69_[EQX] GC-01-008-1-08

97.4 %
39 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 9

Notes: 9 > FP1

21._EQX_69_[EQX] GC-01-8-1-8

51.4 %
36 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Field: 1, Block: 1, Rep: 6, Tree: 10 > FP2

Notes: Brazil_Selections_Poss_grandparent

22._EQX_69_[EQX] RUQ_100

51.4 %
36 shared markers

View View all Clone Any

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Notes: Reading_Collection

Key to SNP Markers

Key to SNP Markers

1	TcSNP75	2	TcSNP90	3	TcSNP144	4	TcSNP150	5	TcSNP151
6	TcSNP174	7	TcSNP193	8	TcSNP226	9	TcSNP230	10	TcSNP242
11	TcSNP329	12	TcSNP364	13	TcSNP372	14	TcSNP448	15	TcSNP469
16	TcSNP529	17	TcSNP560	18	TcSNP577	19	TcSNP591	20	TcSNP602
21	TcSNP619	22	TcSNP702	23	TcSNP723	24	TcSNP731	25	TcSNP799
26	TcSNP823	27	TcSNP872	28	TcSNP878	29	TcSNP891	30	TcSNP998
31	TcSNP999	32	TcSNP1060	33	TcSNP1063	34	TcSNP1111	35	TcSNP1126
36	TcSNP1253	37	TcSNP1309	38	TcSNP1439	39	TcSNP1442	40	TcSNP1458
41	TcSNP1484